Nematode Community Composition Research Articles

Altitudinal variation in soil nematode communities in an alpine mountain region of the eastern Tibetan plateau

Distribution patterns of species diversity in high mountains have received considerable attention in scientific research and conservation efforts. However, our understanding of the corresponding altitudinal patterns of soil fauna across spatial scales, particularly on high-altitude plateaus, remains limited. To address this gap, we conducted a case study on Balang Mountain, located at the eastern margin of the Tibetan Plateau. Our focus was on soil nematodes within an altitudinal range of approximately 3000 to 4000 m. We collected climate, soil, and vegetation data to test multiple hypotheses, including the effects of energy, water availability, productivity, soil resource availability, and pH constraints on nematode communities. Dominance analysis and commonality analysis were employed to determine the relative support of these hypotheses in explaining nematode abundance, diversity, and composition. Beta-diversity, which links local alpha-diversity and regional gamma-diversity, was decomposed into distinct components to elucidate ecological processes along altitude and across diversity facets. Our findings revealed distinct yet significant altitudinal patterns in nematode abundance (concave-down), richness (monotonous decrease), and evenness (concave-up). Water and soil resource availability emerged as dominant factors influencing nematode abundance, while energy and pH played pivotal roles in determining nematode richness. Additionally, water and productivity were identified as the most significant drivers shaping nematode community composition. Furthermore, a significant influence of pH on gamma- and beta-diversities was observed, surpassing the impact of other predictors at a coarse level. Upon decomposing beta-diversities into different components, we discovered that taxa substitution (turnover) and individual substitution (balance-variation) were the primary contributors to community dissimilarity among altitudes, indicating strong effects of environmental sorting or spatial and historical constraints on soil nematode communities. These findings contribute to our understanding of the distribution patterns and processes of soil nematode communities along altitude in alpine ecosystems. Moreover, they offer valuable insights into soil biodiversity distribution and conservation in high-mountain environments.

Phosphorus addition ameliorates soil micro-food web simplification due to nitrogen enrichment but does not restore nematode community composition

Phosphorus addition ameliorates soil micro-food web simplification due to nitrogen enrichment but does not restore nematode community composition

The effect of anaerobic digestate as an organic soil fertilizer on the diversity and structure of the indigenous soil microbial and nematode communities.

Anaerobic digestate is a popular soil additive which can promote sustainability and transition toward a circular economy. This study addresses how anaerobic digestate modifies soil health when combined with a common chemical fertilizer. Attention was given to soil microbes and, a neglected but of paramount importance soil taxonomic group, soil nematodes. A mesocosm experiment was set up in order to assess the soil's microbial and nematode community. The results demonstrated that the microbial diversity was not affected by the different fertilization regimes, although species richness increased after digestate and mixed fertilization. The composition and abundance of nematode community did not respond to any treatment. Mixed fertilization notably increased potassium (K) and boron (B) levels, while nitrate (NO3-) levels were uniformly elevated across fertilized soils, despite variations in nitrogen input. Network analysis revealed that chemical fertilization led to a densely interconnected network with mainly mutualistic relationships which could cause ecosystem disruption, while digestate application formed a more complex community based on bacterial interactions. However, the combination of both orchestrated a more balanced and less complex community structure, which is more resilient to random disturbances, but on the downside, it is more likely to collapse under targeted perturbations.

Drought shifts soil nematode trophic groups and mediates the heterotrophic respiration

Abstract As the most diverse metazoan taxa, soil nematodes serve a diversity of functions in soil food webs and thus can regulate microbial community composition and affect organic matter decomposition and nutrient turnover rates. Because nematodes depend on water films to access food resources, drought can negatively affect nematode–microbial food webs, yet the impacts of drought on nematode diversity and abundance and how these changes may influence food web members and their functions are hardly explored. Here, we coupled research along a drought gradient in arid and semiarid grasslands with a detailed intact plant–soil microcosm experiment to explore the patterns and mechanisms of how drought impacts nematode abundance and carbon footprint, microbial phospholipid fatty acid (PLFA) and heterotrophic soil respiration. Overall, in the field and the microcosm experiments, we found that nematode abundance, carbon footprint and diversity, microbial PLFA and heterotrophic respiration were reduced under drier conditions. In addition, drought altered nematode and microbial community composition, through reducing the nematode channel ratio and increasing the relative fungivorous nematode abundance and the fungal to bacterial ratio. The soil decomposition channel shifted from a bacterial to a fungal pathway in response to drought, indicating decelerated heterotrophic respiration under drought. These results highlight the important contribution of soil nematodes and their associated microbial food web to soil carbon cycling. Our findings underscore the need to incorporate key soil fauna into terrestrial ecosystem model evaluation.

Effect of Application Rates of N and P Fertilizers on Soil Nematode Community Structure in Mollisols

Long-term application of chemical fertilizer poses an environmental threat to belowground ecosystems. However, the impact of nitrogen (N) or phosphorus (P) fertilizers on soil biodiversity and the conditions of soil food web remains largely unknown. Soil nematodes are the most abundant multicellular soil animals and serve as excellent bioindicators of soil. Here, we investigated soil nematode communities and food web structure in a long-term experiment with different application rates of N and P fertilizers in northeast China. The application of N and P fertilizers increased the abundance of bacterivores but suppressed the abundance of omnivores and predators. The abundance of bacterivores exhibited an increasing trend, while that of omnivores and predators showed a decreasing trend with increasing rates of N and P fertilizers. Plant parasites displayed a decreasing trend in response to N fertilizer, but not to P fertilizer. N and P fertilizers also altered nematode functional guild composition, with N fertilizer increasing the abundance of Ba1, and P fertilizer increasing the abundance of Fu2 and Ba3. Nonmetric multidimensional scaling (NMDS) analysis revealed apparent successions of nematode communities from no fertilizer soils to high rates of N or P fertilizer soils at both the genus and functional guild levels. Furthermore, N and P fertilizers resulted in different nematode communities. In terms of nematode food web indices, N fertilizer increased the enrichment index (EI) but reduced the channel index (CI) and structure index (SI), whereas P fertilizer only reduced the SI value. High rates of N and P fertilizers increased the respired carbon of bacterivores but reduced the respired carbon of predators. Mantel tests revealed significant correlations between soil properties and the community composition of both fungivores and omnivores. Among all soil properties, available phosphorus (AP) had the greatest influence on the community structure of soil nematodes. Our findings indicate that N fertilizer has a powerful effect on nematode food web structure, while P fertilizer exerts a stronger effect on soil nematode community composition.

A combined amplicon approach to nematode polyparasitism occurring in captive wild animals in southern China

BackgroundGastrointestinal tract (GIT) nematodes prefer to live in the intestines of wild animals, causing damage and even death, and posing a zoonotic risk. The polyparasitism of GIT nematodes results in the complex dynamics of the nematode communities that occur naturally in wild animals. However, the nematode community in captive wild animals is poorly understood.MethodsWe combined  microscopic examination and amplicon sequencing for community diversity.ResultsWe characterized GIT nematode assemblages to one order, one family, four genera, and ten species, in 512 fecal samples of 121 species from captive wild animals in southern China. The positive rate of GIT nematodes was 20.7% (106/512), including 42.3% (11/26) in reptiles, 26.5% (39/147) in herbivores, 25.0% (25/100) in non-human primates, 20.0% (5/25) in omnivores, 12.2% (9/74) in carnivores, and 12.1% (17/140) in avians. The dominant nematodes were Haemonchus contortus in herbivores and Trichuris species in primates. The nematode communities of arboreal primates differed from their terrestrial counterparts, reflecting both host phylogeny and ecological constraints. Soil-transmitted Strongyloides species were widespread throughout the herbivore, primate, avian, and carnivore communities, and tended to infect omnivorous primates and terrestrial herbivores. In addition, new Trichuris and Heterakis species were found in the nematode communities of captive porcupines and peafowls.ConclusionThis study highlights the variation in the composition of the GIT nematode community and strengthens the attention to the harms induced by zoonotic nematodes and co-infective nematodes with low species richness.Graphical

Nematodes as bioindicators of soil health in different land uses in the São Francisco River Valley, Brazil

Summary Brazilian Caatinga is one of the most diverse, seasonally dry, tropical forests of the world and is threatened by strong land use pressure and poor protection. One way of understanding changes in the soil conditions caused by anthropogenic activities is using the nematode assemblages as potential bioindicators. This study analysed changes in nematode communities in three different types of land use (natural forest-CA, natural area with accumulation of salts-SS, and agricultural growing areas, such as cover crops-CC for cattle and fruit trees-IC) in the Caatinga, in the sub-median region of the São Francisco River Valley (SFRV), Pernambuco, northeastern Brazil. We recorded a total of 63 262 nematode individuals, representing 42 genera, belonging to 23 families. Nematode abundance, diversity and maturity indices were highest in the CC and lowest in the SS. Among the nematode trophic groups, bacterivores, omnivores + predators and plant parasites were significantly affected by type of land use. Different soil properties were related to the differences in taxonomic composition among the natural and agricultural areas, accounting for 26.6% of the total variation. In general, our results indicate that soil salinisation and desertification in the natural areas, as well as soils subjected to cover crops and fruit tree production, significantly influenced the composition of nematode communities in the São Francisco River Valley.

Nematode communities along a bathymetric transect in the deep eastern Fram Strait (Arctic Ocean): interrelations between diversity, function and environment

As an expansion of a time-series study on meiobenthos in the Arctic deep sea, the diversity of free-living nematode communities along nine stations along a bathymetric transect was investigated morphologically in taxonomic and functional regards (feeding-type composition, life-history traits, tail-shape composition) and compared with previous studies of the same transect to investigate possible changes in the nematode community composition. Special emphasis was given on the analysis of sedimentary environmental parameters, which are used as proxies for food availability and sediment porosity. Multivariate statistics performed on nematode abundance data revealed a bathymetric zonation into four bathymetric zones: upper bathyal (1300 – 2000 m), lower bathyal (2500 - 3500 m), abyssal (5100 – 5600 m) and an additional ‘outgroup’ consisting of two stations with low nematode densities. Nematode densities generally decreased with increasing depth. Taxonomic diversity (EG(50), H’(log2), J’) decreased in a unimodal pattern peaking in the lower bathyal zone. A distance-based linear model revealed that 44% of the total variation in nematode abundances could be explained by the measured environmental parameters. Microbial feeders are the dominant feeding type along the transect with increasing dominance in the abyssal zone. The maturity index, a measure of environmental disturbance, decreased with depth, indicating a more colonizer-dominated community in the abyssal zone. Nematodes with long conico-cylindrical tails also become more dominant in the abyssal zone. A previous study of the same transect conducted in 2005 found a similar bathymetric zonation, but with a strikingly different dominant feeding type, i.e. epistrate feeders. Between the 2005 study and the year 2010 we conducted our study, the composition of the plankton community in the Fram Strait changed significantly due to a warm water anomaly in the region. We argue that through bentho-pelagic coupling, effects of this warm water anomaly on plankton communities could be a reason for the drastic change in dominant nematode feeding types.

Reassessing soil nematode diversity under fertilization in a paddy–upland rotation system

Soil nematode diversity is a widely-used indicator for assessing the impact of agricultural practices, such as fertilization, on soil ecosystems. Organic fertilization is generally considered beneficial for nematode diversity. However, comparisons of diversity indices are sensitive to sample completeness, and unequal completeness can result in unfair comparisons among assemblages. In this study, we applied the statistical framework of Hill diversity, which accounts for equally complete samples, to estimate nematode diversity under different fertilization conditions in a paddy rice-upland wheat rotation system over three years. Our findings revealed that crop phase had a more pronounced influence on nematode community composition compared to fertilization or sampling year, although all three factors significantly affected nematode community composition. The sampling was incomplete, and coverage varied among samples for diversity comparison; for instance, sample coverage values were generally higher in the rice phase than in the wheat phase. After standardizing samples by completeness, we observed substantial variation in nematode diversity among years, regardless of whether more emphasis was placed on rare taxa (richness), abundant taxa (Shannon diversity), or dominant taxa (Simpson diversity). Moreover, the influence of crop phase on nematode diversity became particularly evident when examining diversity metrics that highlight rare and abundant taxa (e.g., richness and Shannon diversity). However, the effects of fertilization on nematode diversity were overshadowed by pronounced yearly variations. This study emphasizes the pivotal role of crop phase in shaping nematode community composition and diversity, while raising questions about the impacts of fertilization on nematode diversity when yearly variation is not considered. Additionally, we validated the suitability of Hill diversity for equally complete samples as an approach for a fair comparison of nematode diversity in soil ecosystems.

Cover crop functional types alter soil nematode community composition and structure in dryland crop-fallow rotations

Increasing dryland cropping intensity by integrating cover crops into crop-fallow rotations can add diversity and alter soil ecosystem functions, including improvements in soil nutrient and water retention and cycling, and suppression of soil-borne pests. However, the use of cover crops can also carry the risk of increasing the abundance of plant-parasitic nematodes that could undermine system productivity. Here, we examined how the integration of diverse cover crops of different functional groups: Poaceae [forage oat (Avena sativa L.)]; Brassicaceae [forage rape (Brassica napus L.)]; and Fabaceae [common vetch (Vicia sativa subsp. sativa L. and fababean (Vicia faba L.) in monocultures and mixtures into a dryland crop-fallow rotation altered soil nematode community composition and structure relative to conventional fallows. We found that cover crop mixtures had greater diversity and complexity of free-living nematodes, indicating enhanced cycling of energy and nutrients (enrichment index >50 %) compared to monocultures. Furthermore, using a structural equation modelling approach, we showed the abundance of free-living nematodes is driven primarily by cover crop residue quality (C:N ratio, and cellulose content) and marginally by cover crop quantity (biomass). The grass-legume mixture had the highest abundance of plant-parasitic nematodes (Pratylenchus neglectus and Merlinius brevidens) but also fostered robust soil food webs with complex soil nematode trophic interactions, indicating promotion of soil ecosystem functions related to N and C cycling and overall improvement in soil health. The results indicate bottom-up effects of cover crops on soil nematode communities are modulated by cover crop functional type and mixture composition. Consequently, cover crops with appropriate traits must be selected if soil health is to be improved via suppression of plant-parasitic nematodes, promotion of free-living nematodes, and enhancement of soil food web complexity.

Effects of wild boar grubbing on the soil nematode community subject to seasonal variation in a broad-leaved Korean pine forest in Northeast China

Soil disturbances caused by large animals impact soil biodiversity and potentially alter forest ecosystem functioning and productivity. However, most studies have focused on the effects of wild boar infestations on above-ground vegetation and soil physical and chemical properties. Little is known about the influence of wild boar grubbing on the soil faunal community within forested ecosystems. To address this knowledge gap, we conducted a long-term (10-year) exclosure experiment to investigate the responses of soil nematode communities to wild boar grubbing and seasonal variations in a broad-leaved Korean pine forest in Changbai Mountain, China. The results indicated that wild boar grubbing did not significantly impact soil nematode abundance, genus richness, diversity indices (Shannon-Wiener diversity index, Simpson index, and evenness index), and ecological indices (enrichment index, channel index, structural index, and basal index). However, we observed that grubbing reduced the relative abundance of plant parasites while increased that of bacterivores and the maturity index (MI), leading to changes in nematode community composition. Notably, the influence of grubbing was more pronounced in the spring than in the autumn. Although season itself did not significantly affect soil nematode genus richness and diversity indices, it did affect soil nematode relative abundance, bacterivores, omnivores-predators, plant parasites, K-strategistis, r-strategistis, MI, enrichment index, and channel index. Long-term wild boar grubbing appeared to mitigate seasonal effects on soil nematode communities, resulting in higher MI and increased stability in nematode community abundance. Our findings suggest that changes in soil parameters, such as soil NH4+, soil pH, and soil NO3–, likely mediate the observed impact of wild boars on the soil nematode community. In summary, our study demonstrated that wild boar grubbing altered the structure of soil nematode communities, albeit with seasonal variations, indicating that the effects of wild boar activity on forest soil ecosystems influence biogeochemical cycles through changes in nematode community composition rather than nematode genera richness.

Effect of land use on soil nematode community composition and co-occurrence network relationship

Effect of land use on soil nematode community composition and co-occurrence network relationship

Distribution and characterization of nematodes in above-ground microhabitats in a natural pristine cedar forest in Yakushima Island, Japan

Nematode communities in natural pristine forests composed of trees aged over 1000 years have not been thoroughly studied. Old-growth forests can provide diverse microhabitats for nematodes such as fallen trees with mossy conditions. This study aimed to characterize the community and trophic compositions of nematodes in relation to different microhabitats in old-growth Japanese cedar ( Cryptomeria japonica (L. f.) D. Don) forests in Yakushima Island, Japan. To this aim, nematodes retrieved from four different types of microhabitats were morphologically identified at the family/genus level and divided into five trophic groups. A nonmetric multidimensional scaling scatterplot showed that nematode communities clustered significantly in each microhabitat and their community compositions were significantly affected by C/N ratio. With respect to nematode trophic composition, bacterivorous nematodes dominated decaying barks of fallen trees, with a relative abundance of 45%, while fungivorous nematodes were dominant in living barks of cedar trunks (61%). Predatory–omnivorous nematodes predominated in mosses of fallen trees (51%). These results showed that nematode community and trophic composition were different among microhabitats characterized by nutrient conditions. The predatory–omnivorous nematodes were abundant in mosses with N-rich conditions. In contrast, fungivorous nematodes were abundant in cedar trunks with high C/N conditions. Thus, old-growth natural forests can provide diverse microhabitats where various nematode taxa coexist due to the presence of fallen trees and mosses.

Spatiotemporal distribution patterns of soil nematodes along an altitudinal gradient in the cold temperate zone of China

As important components of the cosmopolitan soil biota, soil nematodes are found at multiple trophic levels of the belowground food web and play an important role in soil function. Exploring the actual patterns of soil nematodes along the altitudinal gradients helps understand the spatial soil ecology. In this study, we used molecular analysis approaches to reveal the soil nematode spatiotemporal changes on Oakley Mountain in the northern Greater Khingan Mountain Ranges Northeast China. Our results showed that although the alpha diversity of nematode communities generally decreased with the increased altitude, it did not exhibit a monotonic decrease pattern. Bacterial feeding nematodes occupied the largest proportion among all nematode feeding types. Altitude had a more significant effect than soil depth on the structure of nematode community in all seasons. Soil bulk density, moisture, dissolved organic carbon, temperature, pH, nitrate nitrogen, and total phosphorus were the significant soil variables driving the composition of nematode community. The co-occurrence networks of soil nematode communities showed a distinct seasonal pattern. The nematode community networks in May and September had more modes and links, higher average degrees, and higher average clustering coefficients than the network in July. We demonstrated that the variance of nematode community structure in different altitudes and soil depths could be well explained by edaphic factors. This study extends our knowledge of the nematode spatial ecology in cold temperate regions and contributes to further investigation of soil ecological processes in global challenges.

Neonicotinoid Seed Treatments Influence Soil Nematode Taxonomic Composition and the Soil Microbial Cooccurrence Networks

Neonicotinoid insecticides are widely used to control early-season and foliar-feeding pests. Some studies have revealed their nontarget impacts on pollinators and other invertebrates but few investigated their effects on soil microbiota. Given the crucial role of soil prokaryotic and eukaryotic microbial communities in agroecosystem regulation and their contribution to soil fertility, it is critical to understand their structure and changes in response to disturbances such as pesticide application. Among these communities, free-living nematodes have the potential to indicate the ecological changes in soil caused by environmental stress and have a key role in forming and modulating soil microbial composition and function by feeding on other soil microorganisms or interacting with them. Here, we used 18S ribosomal RNA gene amplicon sequencing to characterize the effects of neonicotinoids on soil nematode communities in a 3-year soybean-corn crop rotation in Quebec, Canada. We also quantified the changes in nematode-bacteria cooccurrence networks in soil exposed to neonicotinoids. We found that neonicotinoid seed treatment significantly explained variation in nematode community composition and affected the relative abundance of some nematode families, such as a decrease in the omnivorous family Dorylaimidae in neonicotinoid-treated samples. Moreover, neonicotinoids altered the patterns of nematode-bacteria cooccurrence, including the structure and taxonomic composition of the networks. However, it is unclear whether neonicotinoids affected bacterial cooccurrence networks directly, or indirectly by affecting nematodes that feed on bacteria. Further research is needed to understand how neonicotinoids affect nematodes and the role of nematodes in microbial network variation in soil exposed to neonicotinoids.

The effects of Eisenia fetida and Metaphire guillelmi on the soil micro-food web in a microcosm experiment.

Numerous studies have shown that the function of earthworms may depend on their ecotype and density, which affects how they impact soil microbial and nematode communities. However, it is unclear how different earthworm species and densities alter the composition of soil microbial and nematode communities and how these modifications impact the soil micro-food web. The structural equation model (SEM) is a more accurate tool for identifying the intricate relationships between various trophic levels in the soil micro-food webs than the widely used bivariate data analysis. In order to ascertain the effects of earthworm species, including epigeic earthworm Eisenia fetida and anecic earthworm Metaphire guillelmi, as well as varying densities on the composition of main microbial groups, soil nematodes and their relationships, a microcosm experiment was conducted in a greenhouse. After nine weeks of observation, compared with the control treatments, Eisenia fetida increased the biomasses of total microorganism and bacteria, whereas Metaphire guillelmi decreased the biomasses of total microorganism, bacteria, and gram-positive bacteria, but showed an increase in AMF biomass. Additionally, both two earthworm species decreased the abundance of total soil nematode, bacterivores, and omnivore-predators, which is in contrast with the control treatments. The SEM results indicated that the addition of Eisenia fetida at different densities had indirect negative effects on the abundance of omnivore-predators, as it significantly increased the content of soil organic carbon, ammonium nitrogen, and nitrate nitrogen. The bottom-up effects were found to be the dominant forces, which promoted bacterial-dominated decomposition channels. The addition of Metaphire guillelmi with different density had direct negative impact on bacterivores and fungivores. Moreover, it had indirect negative effects on omnivore-predators by altering the soil properties. The dominant forces were still the bottom-up effects. Our study suggests that different earthworm species have distinct mechanisms that affect the soil micro-food web in different ways.

Extracting DNA from soil or directly from isolated nematodes indicate dissimilar community structure for Europe-wide forest soils

Nematodes are numerous in soils and play a crucial role in soil food-webs. DNA metabarcoding offers a time-effective alternative to morphology-based assessments of nematode diversity. However, it is unclear how different DNA extraction methods prior to metabarcoding could affect community analysis. We used soils with woody vegetation from a European latitudinal gradient (29 sites, 39 to 79°N, ∼4500 km, covering six biomes) to systematically evaluate the effect of two sources of nematode DNA either directly extracted from soils vs. extracted from nematodes previously isolated from soils hypothesizing that the DNA source material may produce different diversities, community structures and abundances of feeding types. Nematode-sample DNA exhibited a higher richness, while no difference in Shannon diversity was found between the approaches. The DNA sources also created significantly different community structures, with greater differences observed across soil-extracted DNA than nematode-sample DNA. The most overrepresented species in nematode-sample DNA were Heterocephalobus elongatus, Eucephalobus striatus and Hexatylus sp., whereas Phasmarhabditis sp. and Eumonhystera filiformis were overrepresented in soil-extracted DNA. Read abundances of feeding types significantly differed between the DNA sources and across sites, with a significant effect of biome on both ecto- and endoparasitic herbivores in soil-extracted DNA and for ectoparasitic herbivores only in nematode-sample DNA. Collectively, our data suggest that choice of the DNA source material may lead to different patterns of nematode community composition across space and environmental conditions. Improving the sensitivity of the soil-extracted DNA method by developing protocols using larger amounts of soil and designing nematode-specific primers will make this approach an efficient screening tool to analyse nematode diversity and community structure complementing the labour-intensive isolation of intact nematodes from soils (nematode-sample DNA).

Unraveling the interaction effects of soil temperature and moisture on soil nematode community: A laboratory study

Soil nematode communities and their functions are simultaneously influenced by abiotic factors such as temperature and soil moisture. However, the complex interaction effects of these factors have not been clearly demonstrated, limiting our understanding of soil biodiversity and functions under different climate scenarios. Here, we conducted a short-term microcosm experiment, implementing three temperature treatments (20 °C, 25 °C, and 30 °C) combined with two soil moisture treatments (50% and 80% water-holding capacity). We comprehensively assessed the changes in abundance, diversity, composition, and functions (carbon footprints) of soil nematode communities under these different treatments. Our findings revealed that temperature and moisture did not have significant effects on the richness or Shannon diversity of nematodes, while they did have significant impacts on other properties. We found that the interaction effect between temperature and moisture had a greater influence on total abundance compared to their independent effects. Moisture emerged as the primary driver of nematode community composition, followed by the interaction term, while temperature exhibited the least influence. Contrary to expectations, increasing temperature did not cause a shift in the community towards small-bodied genera when considering intraspecific variability in body mass. However, elevating moisture level led to an increase in community-weighted mean body mass, irrespective of intraspecific variability. Consequently, the body-mass-related footprints varied among treatments when considering intraspecific variability, with the dominant influence arising from the interaction effect. Overall, our study highlights the dominant interaction effect of temperature and soil moisture on multiple ecological properties of nematode communities. Additionally, we underscore the importance of incorporating intraspecific trait variability when assessing the responses and functions of nematodes under distinct environmental conditions.

Responses of soil nematode abundance and food web to cover crops in a kiwifruit orchard.

Soil biodiversity plays an important role in both agricultural productivity and ecosystem functions. Cover crop species influence the primary productivity of the ecosystem and basal resources. However, it remains poorly understood how different cover crop treatments influence the community of soil nematodes in an orchard ecosystem. In this study, field experiments were conducted to investigate the effects of cover crop treatments with different species numbers, i.e., no cover crop (CK), two cover crop species (C2), four cover crop species (C4), and eight cover crop species (C8), on weed biomass, together with composition, abundance, and metabolic footprint of soil nematode community in a kiwifruit orchard. As compared to the CK group, the groups of cover crop treatments had lower weed biomass, which decreased with the increase of the cover crop diversity. Moreover, for the abundance of total nematodes, fungivores exhibited higher levels in C4 and C8 treatments than that in CK, bacterivores had a higher abundance in C4 treatment, and plant parasites had a higher abundance in C2 and C8 treatments. Cover crop treatments also changed the structure of nematode community and enhanced the nematode interactions and complexity of nematode community network. In addition, C4 increased the Wasilewska index but decreased the plant-parasite index. The metabolic footprints of fungivores were higher in cover crop treatments compared with CK, and C4 and C8 also increased the functional metabolic footprint of nematode. Soil nematode faunal analysis based on nematode metabolic footprints showed that C8 improved the soil nutrient status and food wed stability. Mantel test and redundancy analysis showed that soil microbial biomass nitrogen and carbon, organic carbon, nitrate nitrogen, moisture content, pH, and cover crop biomass were the main factors that affect soil nematode community. In conclusion, cover crop treatments with four or eight plant species displayed a positive role in weed control, improvement of soil health, and promotion of energy flow in the soil food web through the increase in the metabolic footprints of nematodes in kiwifruit orchard.

Linking Nematode Communities and Soil Health under Climate Change

Soil health is intimately intertwined with ecosystem services. Climate change negatively impacts ecosystem functioning, by altering carbon and nitrogen biogeochemical cycles and shifting nutrient bioavailability, thus hampering food production and exacerbating biodiversity loss. Soil ecosystem services are provided by belowground biota, and as the most abundant metazoans on Earth, nematodes are key elements of soil food webs and reliable bioindicators of soil health. Here, we carry out a literature review from 2019, the year that the Intergovernmental Panel on Climate Change published a report relating and expressing serious concerns on the effects of climate change on the land degradation and sustainability of terrestrial ecosystems. We focus on documenting and discussing the composition of nematode communities contributing to improving soil health, and soil management practices to promote their presence and limit the effects of climate change on soils. By recognizing beneficial nematodes as plant-promoting agents, we could harness their potential to our benefit, catalyze decomposition services, improve plant performance, and increase carbon sequestration. This way, we will contribute to soil health and a well-balanced and well-managed system, making it possible to increase productivity, guarantee food security, and reduce the yield gap, with a limited human footprint on the environment.